PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G00258.1.p
Common NameEUGRSUZ_G00258
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 258aa    MW: 28598.9 Da    PI: 7.5026
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G00258.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.71.5e-30120177258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                       dDg++WrKYGqKe+ gs++pr YYrCt+  gC++kk+v+rs++dp+v+ei+Y+g+H++
  Eucgr.G00258.1.p 120 DDGFSWRKYGQKEILGSKYPREYYRCTHVqGCWAKKQVQRSDDDPTVFEIMYRGRHTC 177
                       8***************************99**************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.2E-29106177IPR003657WRKY domain
SuperFamilySSF1182903.27E-26114177IPR003657WRKY domain
SMARTSM007741.7E-37119179IPR003657WRKY domain
PROSITE profilePS5081121.964120175IPR003657WRKY domain
PfamPF031063.1E-27120177IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MEDWEKMNLP NELIQGRELT KQLQRQLHLA VSSSSSSSHE QTQEMLIRGI PTSYDKALSM  60
LNAEPPAGGC PRRLSVSPPS LGGSPMSRGD SDRNLDDGST PRKREAMQRW TERVRAPTPD  120
DGFSWRKYGQ KEILGSKYPR EYYRCTHVQG CWAKKQVQRS DDDPTVFEIM YRGRHTCIDH  180
PATVVPSSPL PENQTDSNAS IDDAPLQIRE LPVYVSAATS GKNSQATAFA TVDNRPQVRW  240
GLIGLERGST LLGSGEA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-131201751872Probable WRKY transcription factor 4
2lex_A2e-131201751872Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G00258.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010068016.11e-160PREDICTED: disease resistance protein At4g27190-like
TrEMBLA0A059B9V80.0A0A059B9V8_EUCGR; Uncharacterized protein
STRINGPOPTR_0012s01380.19e-58(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19332783
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.13e-38WRKY family protein